Rafi Ahmad



  • Jawad Ali, Wenche Johansen, Rafi Ahmad :
    Short turnaround time of seven to nine hours from sample collection until informed decision for sepsis treatment using nanopore sequencing
    Scientific Reports 2024 DOI
  • Anurag Basavaraj Bellankimath, Crystal Chapagain, Sverre Branders, Jawad Ali, Robert Charles Wilson, Truls E. Bjerklund Johansen et al.:
    Detection of pathogens and antimicrobial resistant genes from urine within 5 hours using Nanopore sequencing
    bioRxiv 2024 DOI
  • Sverre Branders, Manfred G. Grabherr, Rafi Ahmad :
    Real-time Taxonomic Characterization of Long-read Mixed-species Sequencing Samples in Sorted Motif Distance Space: Voyager
    bioRxiv 2024 DATA / DOI
  • Sathi Das, Kanchan Saxena, Jean-Claude Tinguely, Arijit Pal, Nima L. Wickramasinghe, Abdolrahman Khezri et al.:
    SERS Nanowire Chip and Machine Learning-Enabled Classification of Wild-Type and Antibiotic-Resistant Bacteria at Species and Strain Levels
    ACS Applied Materials & Interfaces 2023 DOI
  • Ekaterina Avershina, Abdolrahman Khezri, Rafi Ahmad :
    Clinical Diagnostics of Bacterial Infections and Their Resistance to Antibiotics—Current State and Whole Genome Sequencing Implementation Perspectives
    Antibiotics 2023 ARKIV / DOI
  • Azeem Ahmad, Ramith Hettiarachchi, Abdolrahman Khezri, Balpreet Singh Ahluwalia, Dushan Wadduwage, Rafi Ahmad :
    Highly sensitive quantitative phase microscopy and deep learning aided with whole genome sequencing for rapid detection of infection and antimicrobial resistance
    Frontiers in Microbiology 2023 ARKIV / DOI
  • Asal Ahmadi, Abdolrahman Khezri, Håvard Nørstebø, Rafi Ahmad :
    A culture-, amplification-independent, and rapid method for identification of pathogens and antibiotic resistance profile in bovine mastitis milk
    Frontiers in Microbiology 2023 ARKIV / DOI
  • Sathi Das, Kanchan Saxena, Abdolrahman Khezri, Vishesh Kumar Dubey, Azeem Ahmad, Jean-Claude Tinguely et al.:
    Rapid identification of antimicrobial drug resistance strains of E-coli using SERS nanowire chip
    Proceedings of SPIE, the International Society for Optical Engineering 16. Mar 2023 ARKIV / DOI
  • Jawad Ali, Mukund Joshi, Asal Ahmadi, Knut Olav Strætkvern, Rafi Ahmad :
    Increased growth temperature and vitamin B12 supplementation reduces the lag time for rapid pathogen identification in BHI agar and blood cultures
    F1000 Research 2023 ARKIV / DATA / DOI
  • Jawad Ali, Rafi Ahmad, Knut Olav Strætkvern, Asal Ahmadi, Mukund Joshi :
    Increased growth temperature and vitamin B12 supplementation reduces the lag time for rapid pathogen identification in BHI agar and blood cultures
    Faculty of 1000 2023 DOI
  • Yusuf Khan, Daniel Hammarström, Stian Ellefsen, Rafi Ahmad :
    Normalization of gene expression data revisited: the three viewpoints of the transcriptome in human skeletal muscle undergoing load-induced hypertrophy and why they matter
    BMC Bioinformatics 2022 ARKIV / DOI
  • Ekaterina Avershina, Stephan Alfons Frye, jawad ali, Arne Michael Taxt, Rafi Ahmad :
    Ultrafast and Cost-Effective Pathogen Identification and Resistance Gene Detection in a Clinical Setting Using Nanopore Flongle Sequencing
    Frontiers in Microbiology 2022 FULLTEKST / DOI
  • Niall Hanrahan, Adam Lister, Callum Highmore, Leena Rajith, Ekaterina Avershina, Jawad Ali et al.:
    Enhanced Raman techniques for infection diagnostics
    Proceedings of SPIE, the International Society for Optical Engineering 03. Oct 2022 ARKIV / DOI
  • Ekaterina Avershina, Stephan Alfons Frye, Jawad Ali, Arne Michael Taxt, Rafi Ahmad :
    Ultrafast and Cost-Effective Pathogen Identification and Resistance Gene Detection in a Clinical Setting Using Nanopore Flongle Sequencing
    Frontiers in Microbiology 2022 DOI
  • Ekaterina Avershina, Priyanka Sharma, Arne Michael Taxt, Harpreet Singh, Stephan Alfons Frye, Kolin Paul et al.:
    AMR-Diag: Neural network based genotype-to-phenotype prediction of resistance towards β-lactams in Escherichia coli and Klebsiella pneumoniae
    Computational and Structural Biotechnology Journal 2021 ARKIV / DOI
  • Knut Sindre Mølmen, Jens Konrad Daniel Hammarström, Karianne Pedersen, Anne Cecilie Lian Lie, Ragnvald B. Steile, Håvard Nygård et al.:
    Vitamin D3 supplementation does not enhance the effects of resistance training in older adults
    Journal of Cachexia, Sarcopenia and Muscle 2021 ARKIV / FULLTEKST / DOI
  • Knut Sindre Mølmen, Jens Konrad Daniel Hammarström, Gunnar Slettaløkken Falch, Morten Grundtvig, Lise Koll, Marita Hanestadhaugen et al.:
    Chronic obstructive pulmonary disease does not impair responses to resistance training
    Journal of Translational Medicine 2021 FULLTEKST / ARKIV / DOI
  • Abdolrahman Khezri, Ekaterina Avershina, Rafi Ahmad :
    Hybrid Assembly Provides Improved Resolution of Plasmids, Antimicrobial Resistance Genes, and Virulence Factors in Escherichia coli and Klebsiella pneumoniae Clinical Isolates
    Microorganisms 2021 FULLTEKST / ARKIV / DOI
  • Maria Vittoria Modica, Rafi Ahmad, Stuart Ainsworth, Gregor Anderluh, Agostinho Antunes, Dimitris Beis et al.:
    The new COST Action European Venom Network (EUVEN)—synergy and future perspectives of modern venomics
    GigaScience 2021 ARKIV / DOI
  • Abdolrahman Khezri, Birgitte Narud, Else-Berit Stenseth, Teklu Tewoldebrhan Zeremichael, Frøydis Deinboll Myromslien, Robert Charles Wilson et al.:
    Sperm DNA Hypomethylation Proximal to Reproduction Pathway Genes in Maturing Elite Norwegian Red Bulls
    Frontiers in Genetics 2020 ARKIV / DOI
  • Sverre Branders, Rafi Ahmad, Manfred G. Grabherr :
    Real-time Taxonomic Characterization of Long-read Mixed-species Sequencing Samples in Distance-space
    2024
  • Rafi Ahmad :
    How and when is rapid point of diagnostic tools to arrive and reshape management of urosepsis?
    2024
  • Rafi Ahmad :
    Point of diagnosis to direct treatment: Emerging technologies?
    2024
  • Rafi Ahmad :
    Two to five hours of incubation of blood culture bottles in a standard laboratory incubator followed by nanopore sequencing is enough for the identification of sepsis pathogens and their antimicrobial resistance 
    2024
  • Rafi Ahmad :
    Short Turnaround Time of Seven to Nine Hours from Sample Collection Until Informed Decision for Sepsis Treatment Using Nanopore Sequencing
    2024
  • Jawad Ali, Wenche Johansen, Rafi Ahmad :
    Short turnaround time of seven to nine hours from sample collection until informed decision for sepsis treatment using nanopore sequencing
    2024
  • Rafi Ahmad :
    Novel technological solutions for rapid diagnostics of infection and antimicrobial resistance: A One Health approach.
    2024
  • Rafi Ahmad :
    Novel technological solutions for rapid diagnostics of infection and antimicrobial resistance
    2023
  • Rafi Ahmad :
    Novel technological solutions for rapid diagnostics of infection and antimicrobial resistance:A One Health approach
    2023
  • Rafi Ahmad :
    Novel technological solutions for rapid diagnostics of infection and antimicrobial resistance:A One Health approach
    2023
  • Rafi Ahmad :
    AMR-Educate: Current Status and plans forward
    2023
  • Rafi Ahmad :
    A culture-amplification-independent, and rapid method for identification of pathogens and antibiotic resistance profile in bovine mastitis milk
    2023
  • Rafi Ahmad :
    What is AMR-Educate?
    2023
  • Rafi Ahmad :
    Transforming Research, Education, and Innovation in Antimicrobial Resistance
    2023
  • Crystal Chapagain, Jawad Ali, Sverre Branders, Rafi Ahmad :
    Rapid Detection of Pathogens and Antimicrobial Resistance in Urine Using Nanopore Sequencing
    2023
  • Jawad Ali, Rafi Ahmad :
    Multi-excitation Raman spectroscopy complements whole genome sequencing for rapid detection of bacterial infection and resistance in WHO priority pathogens
    2023
  • Jawad Ali, Rafi Ahmad :
    Rapid Diagnostics of Pathogens and AMR-encoding Genes in Blood Cultures Using Nanopore Sequencing 
    2023
  • Rafi Ahmad :
    Presentation of AMR-Educate project
    2022
  • Rafi Ahmad :
    Novel technological solutions for rapid diagnostics of Infection and Antimicrobial resistance: test cases from human and animal health
    2022
  • Jawad Ali, Rafi Ahmad :
    Rapid diagnostics of pathogens and AMR genes in blood samples using nanopore sequencing
    2022
  • Jawad Ali, Rafi Ahmad :
    Ultrafast and Cost-Effective Pathogen Identification and Resistance Gene Detection in a Clinical Setting Using Nanopore Flongle Sequencing
    2022
  • Mukund Joshi, Rafi Ahmad, Knut Olav Strætkvern :
    Testing of different conditions to accelerate culturing and potentially reduce the time of detection of pathogens and antimicrobial resistance.
    2021
  • Rafi Ahmad :
    AMR-Diag: Neural network based genotype-to-phenotype prediction of resistance towards β-lactams in Escherichia coli and Klebsiella pneumoniae
    2021
  • Rafi Ahmad :
    AMR-Diag Project Personalized Rapid Diagnostics of bacterial infection and antibiotic resistance
    2021
  • Rafi Ahmad :
    Personalized Healthcare: Bioinformatics & Drug Discovery Perspective
    2021
  • Rafi Ahmad :
    Rapid-Diag Project Personalized Rapid Diagnostics of bacterial infection and antibiotic resistance
    2021
  • Rafi Ahmad :
    Rapid-Diag Project Personalized Rapid Diagnostics of bacterial infection and antibiotic resistance [Engelsk]
    2021
  • Maria Vittoria Modica, Rafi Ahmad, Stuart Ainsworth, Gregor Anderluh, Agostinho Antunes, Dimitris Beis et al.:
    Corrigendum to: The new COST Action European Venom Network (EUVEN)-synergy and future perspectives of modern venomics
    GigaScience 2021 DOI
  • Rafi Ahmad, Arne Michael Taxt, Ekaterina Avershina, Stephan Alfons Frye, Mohammed Umaer Naseer :
    Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing
    2020
  • Ambreen Kauser, Avershina Ekaterina, Rafi Ahmad :
    Resistome Identification of Whole Genome Sequencing Data of Norwegian Isolates
    Høgskolen i Hedmark 2020

  • The 50 latest publications is shown on this page. See all publications in Cristin here →